Collagen, Type VII, Alpha-1

Alternative Names

  • COL7A1
  • Long-Chain Collagen
  • LC Collagen
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OMIM Number

120120

NCBI Gene ID

1294

Uniprot ID

Q02388

Length

31,230 bases

No. of Exons

120

No. of isoforms

2

Protein Name

Collagen alpha-1(VII) chain

Molecular Mass

295220 Da

Amino Acid Count

2944

Genomic Location

chr3:48,564,073-48,595,302

Gene Map Locus
3p21.31

Description

This gene encodes the alpha chain of type VII collagen. The type VII collagen fibril, composed of three identical alpha collagen chains, is restricted to the basement zone beneath stratified squamous epithelia. It functions as an anchoring fibril between the external epithelia and the underlying stroma. Mutations in this gene are associated with all forms of dystrophic epidermolysis bullosa. In the absence of mutations, however, an acquired form of this disease can result from an autoimmune response made to type VII collagen. [From RefSeq]

Epidemiology in the Arab World

View Map
Variant NameCountryGenomic LocationClinvar Clinical SignificanceCTGA Clinical Significance Condition(s)HGVS ExpressionsdbSNPClinvar
NM_000094.3:c.188_189delinsCSyriachr3:48594445-48594446PathogenicEpidermolysis Bullosa Dystrophica, Autosomal RecessiveNG_007065.1:g.5807_58088delinsC; NM_000094.3:c.188_189delinsC; NP_000085.1:p.Gly63Alafs*41
NM_000094.3:c.6082G>ALebanonchr3:48575437PathogenicLikely Pathogenic, PathogenicEpidermolysis Bullosa with Congenital Localized Absence of Skin and Deformity of Nails; Dysfibrinogenemia, CongenitalNG_007065.1:g.24816G>A; NM_000094.3:c.6082G>A; NP_000085.1:p.Gly2028Arg762162799379476
NM_000094.3:c.7929+11_26del16Syriachr3:48567815-48567830PathogenicEpidermolysis Bullosa Dystrophica, Autosomal RecessiveNG_007065.1:g.32426_32441del; NM_000094.3:c.7929+11_26del16773394779
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