Interleukin 2

Alternative Names

  • IL2
  • T-Cell Growth Factor
  • TCGF
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OMIM Number

147680

NCBI Gene ID

3558

Uniprot ID

P60568

Length

5,256 bases

No. of Exons

4

No. of isoforms

1

Protein Name

Interleukin-2

Molecular Mass

17628 Da

Amino Acid Count

153

Genomic Location

chr4:122,451,469-122,456,724

Gene Map Locus
4q27

Description

This gene is a member of the interleukin 2 (IL2) cytokine subfamily which includes IL4, IL7, IL9, IL15, IL21, erythropoietin, and thrombopoietin. The protein encoded by this gene is a secreted cytokine produced by activated CD4+ and CD8+ T lymphocytes, that is important for the proliferation of T and B lymphocytes. The receptor of this cytokine (IL2R) is a heterotrimeric protein complex whose gamma chain is also shared by IL4 and IL7. The expression of this gene in mature thymocytes is monoallelic, which represents an unusual regulatory mode for controlling the precise expression of a single gene. The targeted disruption of a similar gene in mice leads to ulcerative colitis-like disease, which suggests an essential role of this gene in the immune response to antigenic stimuli. [From RefSeq]

Epidemiology in the Arab World

View Map
Variant NameCountryGenomic LocationClinvar Clinical SignificanceCTGA Clinical Significance Condition(s)HGVS ExpressionsdbSNPClinvar
NG_016779.1:g.4671T>GLebanonNC_000004.12:g.122456825A>CBenignNG_016779.1:g.4671T>G2069762
NM_000586.3:c.114G>TLebanonNC_000004.12:g.122456327C>ABenignNG_016779.1:g.5169G>TNP_000577.2:p.Leu38=2069763

Other Reports

Oman

Meenagh et al. (2002) used PCR-SSOP method to detect the frequencies of IL2 polymorphisms in different populations, in order to identify global allelic variation and to establish a databank for future studies. Along with the other populations, 80 healthy Omani blood and bone marrow donors were also used in the study. Genomic DNA from these subjects was PCR amplified and resolved. Oligonucleotide probes were used to identify the regions of SNPs by subjecting the PCR products to hybridization with digoxigenin-labeled probes and chemiluminescent detection procedures. Chi-squared test was used to compare allele and genotype frequencies between the populations studied. Departures from Hardy-Weinberg equilibrium were tested by chi-squared goodness of fit test, which revealed a significant departure for the IL-2 (T330G) polymorphism in the Omani population. The T and G allele distributions for this polymorphism were 56.9% and 43.1%, respectively; similar to those seen in the North Irish, Singapore Chinese, and Mexican populations. The TT genotype predominated in this population with a frequency of 40%, followed by TG, and GG (33.8 % and 26.2%, respectively).

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