TATA Box-Binding Protein

Alternative Names

  • TBP
  • SCA17 Gene

Associated Diseases

Spinocerebellar Ataxia 17
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OMIM Number

600075

NCBI Gene ID

6908

Uniprot ID

P20226

Length

18,491 bases

No. of Exons

8

No. of isoforms

2

Protein Name

TATA-box-binding protein

Molecular Mass

37698 Da

Amino Acid Count

339

Genomic Location

chr6:170,554,369-170,572,859

Gene Map Locus
6q27

Description

TBP gene encodes TATA Box-Binding Protein, the DNA-binding subunit of the RNA polymerase II transcription factor D (TFIID). As the name suggests, the TBP subunit attaches to the DNA promoter at its TATA box, to initiate transcription. Binding of the TFIID complex at the promoter helps in positioning of RNA Polymerase II and serves as a scaffold for the assembly of other polypeptides to the transcription complex. It also acts as a channel for regulatory signals.

Mutations in the TBP gene have been associated with Spinocerebellar Ataxia 17 (SCA17), a progressive neurodegenerative disorder characterised by gait and limb ataxia, intention tremors, cerebellar atrophy and behavioural manifestations such as psychosis, disorientation and aggression. SCA17 is caused by the heterozygous expansion of the CAG/CAA trinucleotide repeat in the gene increasing it from 25-42 in the wild-type to 43-66 in the mutant protein. The abnormally long resulting TBP protein accumulates in neurons, leading to their dysfunction and eventual death. Recent studies have also found homozygous and compound heterozygous mutations in the TBP gene of SCA17 affected individuals. TBP gene has also been associated with an increased susceptibility to Late-Onset Parkinson Disease. 

Epidemiology in the Arab World

View Map
Variant NameCountryGenomic LocationClinvar Clinical SignificanceCTGA Clinical Significance Condition(s)HGVS ExpressionsdbSNPClinvar
NM_003194.5:c.231delSaudi ArabiaNC_000006.12:g.170561967delLikely BenignLikely PathogenicSpinocerebellar Ataxia 17NG_008165.1:g.12585del; NM_003194.5:c.231del; NP_003185.1:p.Gln77HisfsTer677701283773065444
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